PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma169g00450.1
Common NameZOSMA_169G00450
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 197aa    MW: 22463.6 Da    PI: 4.8896
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma169g00450.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.35.1e-123177455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      ++  +ErrRR++++++ + Lr+l+P       +K+sK ++L+ A++YI++Lq
  Zosma169g00450.1 31 KNINAERRRRAKLKDSHHALRSLVPII-----TKMSKEATLTDATDYIRKLQ 77
                      55678*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-161889IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.86E-112677No hitNo description
PROSITE profilePS5088814.7862776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.7E-142990IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-93177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-123382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MEFPEHMFNG SGADAVGGGG NSNMVKEYKS KNINAERRRR AKLKDSHHAL RSLVPIITKM  60
SKEATLTDAT DYIRKLQEEI RRLEEELRET LPEDENEENR EEEEDEDKKM DVKGEVDVIP  120
ISRNGFYVKM VCMMSKCRGF SKVVETLGSI GGEMTNVSFN AMDGVCQIMF CLEVEENKRN  180
LKVEKDDVKF LLEKMV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PT801e-142A0A0K9PT80_Z
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119823036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.14e-10bHLH family protein